genomics

  1. hotblack

    Learning about genetics and genomics

    I’ve recently found the NHS Genomics Education programme website, which includes a lot of resources, but the Bitesize genomics videos such as ‘What is genomics?’ and ‘What is Bioinformatics?’ are good accessible introductions. https://www.genomicseducation.hee.nhs.uk/education/...
  2. Sly Saint

    Groundbreaking project seeks to illuminate the complexities of Parkinson's

    Groundbreaking project seeks to illuminate the complexities of Parkinson's (msn.com)
  3. Hoopoe

    Long read sequencing characterises a novel structural variant, revealing underactive AKR1C1 with overactive AKR1C2 .. severe fatigue, 2023, Oakley et

    Long read sequencing characterises a novel structural variant, revealing underactive AKR1C1 with overactive AKR1C2 as a possible cause of unexplained severe fatigue Abstract Background Causative genetic variants cannot yet be found for many disorders with a clear heritable component, including...
  4. Hoopoe

    Speculations about the genetics of ME/CFS and DecodeME

    I felt like writing about this. In my opinion ME/CFS is probably a label for several different poorly understood illnesses that happen to share some characteristics and which do not yet have their own name. We might call them subtypes of ME/CFS. Then, in a ME/CFS cohort there is probably also a...
  5. SNT Gatchaman

    Introduction to Genomics for Engineers

    https://learngenomics.dev/ Audience is computer scientists, but useful for anyone wanting an overview of this complex topic.
  6. R

    100,000 Genomes Pilot on Rare-Disease Diagnosis in Health Care — Preliminary Report, 2021, Smedley et al.

    https://www.nejm.org/doi/full/10.1056/NEJMoa2035790 Abstract BACKGROUND The U.K. 100,000 Genomes Project is in the process of investigating the role of genome sequencing in patients with undiagnosed rare diseases after usual care and the alignment of this research with health care...
  7. Andy

    Genome-wide analysis of 53,400 people with irritable bowel syndrome highlights shared genetic pathways with mood and anxiety disorders, 2021, Eijsbout

    Abstract Irritable bowel syndrome (IBS) results from disordered brain–gut interactions. Identifying susceptibility genes could highlight the underlying pathophysiological mechanisms. We designed a digestive health questionnaire for UK Biobank and combined identified cases with IBS with...
  8. Andy

    Fine mapping of the major histocompatibility complex (MHC) in (ME/CFS) suggests involvement of both HLA class I and class II loci, 2021, Hajdarevic

    Full title: Fine mapping of the major histocompatibility complex (MHC) in myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS) suggests involvement of both HLA class I and class II loci Abstract The etiology of myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS) is unknown, but...
  9. John Mac

    XMRV and Public Health: The Retroviral Genome Is Not a Suitable Template for Diagnostic PCR, ... ME/CFS, 2017, Panelli et al

    XMRV and Public Health: The Retroviral Genome Is Not a Suitable Template for Diagnostic PCR, and Its Association with Myalgic Encephalomyelitis/Chronic Fatigue Syndrome Appears Unreliable Panelli et al https://www.frontiersin.org/articles/10.3389/fpubh.2017.00108/full
  10. Kalliope

    National Human Genome Research Institute: Researchers discover a new auto inflammatory disease called CRIA syndrome

    NIH: National Human Genome Research Institute: Researchers discover a new autoinflammatory disease called CRIA syndrome “It was as if lightning had struck three times in the same place,” said Kastner, who led the NHGRI team. “This discovery underscores the tremendous power of combining astute...
  11. Sly Saint

    NIH Job advert Nov 2019

    National institute of Environmental Health Sciences, Research Triangle Park, NC https://www.training.nih.gov/postdoc_jobs_nih/view/_31/6990/Methods_in_Statistical_Genetics_and_Bioinformatics
  12. E

    OMF: Stanford Genome Technology Center Applies to NIH

    OMF: Stanford Genome Technology Center Applies to NIH https://www.omf.ngo/2019/06/24/sgtc-applies-to-nih/ The Stanford Genome Technology Center (SGTC), under the direction of Ronald W. Davis, PhD, has submitted several RO1 grant applications to NIH to continue and scale up several projects...
  13. TrixieStix

    Wall Street Journal: The Unfulfilled Promise of DNA Testing

    Wall Street Journal: The Unfulfilled Promise of DNA Testing The article weaves the story of a young sick girl thru it by discussing how genetic testing has resulted in her diagnosis changing over and over and over as the science changes constantly. And how this is happening to other patients...
  14. W

    Size matters: just how big is BIG? Quantifying realistic sample size requirements for human genome epidemiology

    Background Despite earlier doubts, a string of recent successes indicates that if sample sizes are large enough, it is possible—both in theory and in practice—to identify and replicate genetic associations with common complex diseases. But human genome epidemiology is expensive and, from a...
  15. Andy

    miRNA profiling of circulating EVs in (ME/CFS), 2018, Almenar-Pérez et al

    Abstract only, or it's a poster presentation? https://search.proquest.com/openview/3ecbf2853f437616f4506cf68f104f30/1?pq-origsite=gscholar&cbl=2030046
  16. Andy

    SMCI RAMSAY 2018: “Whole genome sequencing and analysis of ME/CFS”, Worthey

    Ramsay 2018 award recipient https://solvecfs.org/ramsay-2018-meet-dr-liz-worthey/
  17. Sly Saint

    Identification of Myalgic Encephalomyelitis/Chronic Fatigue Syndrome-associated DNA methylation patterns, 2018, Trivedi, Klimas et al

    Public on Jul 23, 2018 https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE111183 eta: It's an article in PLOSone Published: July 23, 2018 https://doi.org/10.1371/journal.pone.0201066 full study here: http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0201066
  18. Indigophoton

    Multiomics and Human Diseases

    A set of very short (one paragraph) descriptions of the various "omics": genomics, epigenomics, transcriptomics, proteomics, metabolomics and microbiomics. There are also brief videos for each. https://www.news-medical.net/amp/health/Multiomics-and-Human-Diseases.aspx?
  19. Indigophoton

    Genome-Epigenome Interactions Associated with Myalgic Encephalomyelitis/Chronic Fatigue Syndrome, Herrera et al, 2018

    This is a preprint - made available by the authors on bioRxiv before publication while the paper is still in peer review.
  20. A

    'The Second Genome', a 3-part series presented by James Gallagher on BBC Radio 4.

    Edited to change the thread title to that of the BBC Radio 4 3-part series introduced by this online article in BBC Health News: http://www.bbc.com/news/health-43674270 Link to the first episode is in the article but is here for easier ref. http://www.bbc.co.uk/programmes/b09yddx5#play I...
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