Andy
Retired committee member
Open access, https://faseb.onlinelibrary.wiley.com/doi/full/10.1096/fj.201902976RThis study explored the muscle genome‐wide response to long‐term unloading (84‐day bed rest) in 21 men. We hypothesized that a part of the bed rest‐induced gene expression signature would be resilient to a concurrent flywheel resistance exercise (RE) countermeasure.
Using DNA microarray technology analyzing 35 345 gene‐level probe‐sets, we identified 335 annotated probe‐sets that were downregulated, and 315 that were upregulated after bed rest (P < .01). Besides a predictable differential expression of genes and pathways related to mitochondria (downregulation; false‐discovery rates (FDR) <1E‐04), ubiquitin system (upregulation; FDR = 3E‐02), and skeletal muscle energy metabolism and structure (downregulation; FDR ≤ 3E‐03), 84‐day bed rest also altered circadian rhythm regulation (upregulation; FDR = 3E‐02).
While most of the bed rest‐induced changes were counteracted by RE, 209 transcripts were resilient to the exercise countermeasure. Genes upregulated after bed rest were particularly resistant to training (P < .001 vs downregulated, non‐reversed genes). Specifically, “Translation Factors,” “Proteasome Degradation,” “Cell Cycle,” and “Nucleotide Metabolism” pathways were not normalized by RE.
This study provides an unbiased high‐throughput transcriptomic signature of one of the longest unloading periods in humans to date. Classical disuse‐related changes in structural and metabolic genes/pathways were identified, together with a novel upregulation of circadian rhythm transcripts. In the context of previous bed rest campaigns, the latter seemed to be related to the duration of unloading, suggesting the transcriptomic machinery continues to adapt throughout extended disuse periods.
Despite that the RE training offset most of the bed rest‐induced muscle‐phenotypic and transcriptomic alterations, we contend that the human skeletal muscle also displays a residual transcriptomic signature of unloading that is resistant to an established exercise countermeasure.
From what I've scanned I thought this study was pretty interesting, especially this part.
Which to my mind provides circumstantial support to the idea that disrupted sleep patterns in PwME could be as a result of understandable adjustment to the effects of ME, not that disrupted sleep patterns drive ME.An intriguing observation was that 84 days of bed rest induced alterations in several genes and transcription factors involved in circadian rhythm regulation. Muscle activity and nutrient intake are known cues for the circadian rhythm regulation in skeletal muscle.50, 51 Given that diet and time of meals were controlled for in the current study, and the observed differences between bed rest with vs without exercise (see below), our results support the idea of a disuse‐sensitive circadian molecular clock in the skeletal muscle.52-54
These findings add information from in vivo human muscle to past reports describing atypical expression of core clock genes/transcription factors after muscle denervation in mice.55 The Bmal1‐CLOCK complex is the central modulator of the circadian rhythm system. In the current study, the antagonistic factors RORA and NR1D2 were both upregulated after long‐term bed rest, which may be related to a myocellular effort to stabilize the regulatory feedback loop controlling Bmal1 expression, and thus, decrease the impact of the lack of mechanical stimuli on circadian rhythms regulation.
The implications of the unloading‐induced circadian rhythm alterations reported here should not be overlooked, since the cell‐autonomous skeletal muscle clocks have been shown to impact important pathways involved in human skeletal muscle remodeling, and to be essential for proper insulin handling, lipic homeostasis, and myokine secretion
@PhysiosforME , this might be of interest?