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The true nature of an autoimmune disease, Leisk and Nocon 2021

Discussion in 'ME/CFS research' started by Jaybee00, Mar 14, 2021.

  1. Jonathan Edwards

    Jonathan Edwards Senior Member (Voting Rights)

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    Then maybe you are missing the whole point of this forum?
    Why test something for which there is no basis whatsoever other than some random collection of second hand ideas taken from other people's posts on forums strung together in a way that nobody can understand because it doesn't actually add up?

    And if clients are involved presumably you do have a competing financial interest.
     
    Last edited by a moderator: Mar 26, 2021
  2. joshua leisk

    joshua leisk Established Member (Voting Rights)

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    I’m sorry if the 43 pages I took to describe the model was insufficient to communicate the mechanisms involved.

    I was able to piece together multiple results from other researchers from different fields to provide a testable model.

    I’d be more than happy to share a test protocol with anyone who wishes to repeat my work. Cornerstone of science is repeatability.
     
  3. Snow Leopard

    Snow Leopard Senior Member (Voting Rights)

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    Fatigue is a common and non-specific symptom, with many causes. Solutions that may work for some patients suffering from fatigue may not be generalisable to ME/CFS, which is why strict clinical criteria is necessary. The lack of formal diagnoses make your anecdotes less compelling. Likewise, we are less interested in connections with the vast array of other disorders you listed, we are only interested in patients that meet ME/CFS criteria (even then, there are arguably too many case definitions!). Specificity is central to science!

    ME/CFS is not daytime fatigue, nor exercise intolerance. But a specific set of symptoms -
    the loss of mental stamina/concentration and PEM in particular. Many patients are housebound or bedbound and are unable to work. Patients don't necessarily have "fatigue", but high fatigability of all muscles - from facial muscles to the toes. The symptoms people associate with fatigue - stiffness, soreness aren't fatigue itself, but indicate afferent feedback (and a shift in the balance of gamma motor drive versus muscle spindle activity, hence a sensation of stiffness)

    However, I would also like to point out that "involuntary muscle contractions" are not typical for ME/CFS and I personally don't really associate joint pain itself with the condition either, though patients may have joint pain for other reasons. Alopecia likewise is does not have any particular association.

    Some patients have GI issues, others do not. Same with sleeping issues. Most patients I know has tried extensive amounts of dietary modifications and supplements, including more than a few that you mention in your manuscript. I agree that ENT type infections seem to be common.

    My own case is somewhat unusual - I have the same symptoms as ME/CFS, yet my initial illness was Acute motor axonal neuropathy (a form of Guillain Barre Syndrome) which notably, was not triggered by an infection (I did not have symptoms of an infection and I tested negative to a long list of pathogens). In the first 5 years, I had tested negative many times on every test under the sun for EBV, CMV, HHV6 (and once for HHV7) - both serological testing and PCR, with tests done in America as well as Australia. Therefore I still wonder what commonalities there are that don't involve persistent EBV/CMV/HHV6 infections.

    I'd also like to point your attention to the fact that there are specific physiological findings in ME/CFS patients, namely a reduction in the ventilatory threshold (gas exchange threshold) on the 2nd of two CPETs, being repeated after 24 hours. This has been found in over 10 studies and is the most replicated finding so far in the field.

    I'd also like to point out that many patients don't necessarily have decreased VO2Max compared to age/sex norms. There is also suggestive evidence of chronotropic incompetence in a minority of patients, but I am sceptical as to whether patients had sufficient encouragement to actually achieved a true VO2Max so this could be a testing artefact.

    This finding combined with prior electrophysiological testing and recent studies of healthy individuals (investigating the physiological determinants the VT1/gas exchange threshold ), suggests that the fatigue is primarily central in nature, but is mediated through peripheral afferents that in turn reduce excitability of the motor cortex and possibly other areas of the brain. Notably, studies have not found any consistent evidence of mitochondrial disorders or muscle damage post-exercise, which rules out a lot of hypotheses. Though mitochondrial dysfunction could be a downstream consequence of cellular dysfunction, induced in turn due to extracellular factors. (Also note that ALL perceived fatigue is central in nature - supramaximal twitch interpolation EMG studies have found the same results for ME/CFS, peripheral neuropathies, muscular dystrophies and central neuropathies!)

    Of course there are many hypothetical reasons why these afferents are being stimulated, including mitochondrial disorders. But central to all chronic illnesses are feedback loops and particular attention needs to be given to extracellular feedback loops - intracellular metabolic feedback loops are insufficient to explain disease, because it doesn't explain how all of the cells seemed to get into that state in the first place, and secondly, why that state is being maintained throughout the body. Even neoplasms (which necessarily have intracellular metabolic feedback loops) require extracellular mechanisms before they become malignant. "Lifestyle illnesses" likewise, necessarily have characteristic feedback loops - between the biology and behaviour!




    How do you know what their lactate thresholds or oxygenation levels were? Did they undergo cardiopulmonary testing, with blood lactate testing?

    Anyway, with all this in mind, you state several hypotheses relating to the liver. (correct me if I have mischaracterised any of these hypotheses)

    The first is that there is latent infection of the liver by EBV or other herpesviruses and this will either create a metabolic burden for those cells. Or antibodies directed against EBV will target hepatic cells, leading to viral hepatitis like symptoms.

    My first comment is the virus in the latent phase has very little metabolic burden and probably isn't going to lead to much immune activity either. But that still leaves possibility of more active infection. Or the possibility of residual post-viral effects.

    Which begs the question, why don't we see more liver related pathology? For example, there is an absence of signs of hepatitis in most patients. Similarly a lack of other signs such as fibrosis.
    No studies have shown defects in hepatic gluconeogenesis leading to problems with glucose homeostasis. Most patients do not have problems on liver function tests, though a surprising number of patients do report high bilirubin. While some patients do appear to generate more lactate than expected (this is a consequence of altered motor unit recruitment patterns as discussed above with regards to the ventilatory threshold findings), patients don't necessarily have a high level of lactate at baseline, and studies haven't yet found a defect in lactate clearance.

    I have a friend with autoimmune hepatitis and his symptoms were quite different to that of ME/CFS (and his condition is under control with immunomodulating drugs).

    Studies have also not found any unusual hypoxia (multiple studies), despite you stating that it is a "Another CFS/ME feature".

    You also discuss a hypothetical α-KGDH deficiency, though signs of this have not yet been found in any studies.

    I always like to note what happens in genetic disorders when considering deficiencies of specific proteins (whether human diseases if known, otherwise in murine gene knockout models)
    https://rarediseases.info.nih.gov/diseases/617/alpha-ketoglutarate-dehydrogenase-deficiency
    Notably, it leads to hypoglycemia, seizures, ataxia and hypertonia, none of which are typical of ME/CFS.

    The metabolic signs (besides glucose) are increased creatine kinase levels, elevated alpha-ketoglutaric acid in urine, and a decreased plasma beta-hydroxybutyrate-to-acetoacetate ratio.
    No issues with creatine kinase levels before/after exercise have been found. Elevated alpha-ketoglutaric acid was found in the Hanson study you cited, but notably has not been found in the other metabolomics studies (see this 2020 systematic review: https://link.springer.com/content/pdf/10.1186/s12967-020-02356-2.pdf)
    However I note an additional a caveat of these metabolomics studies, namely what goes on in cells in the blood (or spills over into urine) isn't necessarily the same as what goes on in peripheral cells, or in specific organs, given that the microenviroments can be very different.

    As far as I know, no study has found (or investigated) α-Ketoglutarate dehydrogenase function or levels in ME/CFS. Metabolomics studies have contrasting findings of Succinic acid (downstream of α-Ketoglutarate dehydrogenase in the citric acid cycle), with one study finding elevated levels, another finding lower levels, others finding no difference, overall suggesting no significance. However given prior research (and the aforementioned metabolomics studies), I'm not sure this would be something I'd specifically look at.

    Also, note that "Complex IV" is Cytochrome c oxidase, not α-ketoglutarate dehydrogenase.

    As such, I don't find this evidence particularly compelling. But still, I am open to suggestions of specific testable hypotheses that will show pathology (and hasn't already been ruled out by prior studies).

    I'm trying to be polite about this, but your level of education and experience is sufficient to start a post-graduate degree, rather than approaching a PhD standard.

    More than a few patient-members of this forum have (individually) read over 10,000 studies and published peer-reviewed (re)analyses and commentaries in mainstream journals, yet this is merely the equivalent of an undergraduate honours thesis at best. (Of course some members already had masters degrees or PhDs and a few have managed to obtain such degrees despite being ill.) It isn't PhD level research unless you publish a systematic review/meta analysis and publish several primary research studies.
     
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  4. mariovitali

    mariovitali Senior Member (Voting Rights)

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    @joshua leisk

    Perhaps it would be helpful to share with us some possible collaborations that you are currently looking at, for example like the Open Medicine Foundation (OMF) or similar.


    Have you contacted any of them? What was their feedback? Did you have any feedback from any other researcher (ie not tied to any ME patient foundation / group) in the field regarding your hypothesis?

    @Snow Leopard


    Has there been a study where Fibroscans were performed to ME patients to assess Liver fibrosis? I have been "asking" for years about such study and i would be very interested to know when such study was made.
     
    Last edited: Mar 17, 2021
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  5. Snow Leopard

    Snow Leopard Senior Member (Voting Rights)

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    I apologise for your premature excitement, I was referring to signs in clinical practise rather than a formal study, though I agree it would be interesting to see a high-quality study of liver fibrosis (especially as part of a community/population-based study).
     
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  6. mariovitali

    mariovitali Senior Member (Voting Rights)

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    No worries @Snow Leopard :)

    Given the possible association of ME with Ehlers Danlos and collagen, it may be even more interesting to look for liver fibrosis (also directly related with collagen and extracellular matrix).


    Possible role of collagen to ME :

    https://me-pedia.org/wiki/Collagen


    Liver fibrosis and ECM / collagen :

    https://journals.physiology.org/doi/full/10.1152/ajpgi.00132.2011
     
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  7. joshua leisk

    joshua leisk Established Member (Voting Rights)

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    I did try contacting key people in OMF around November last year. Multiple emails and a message via ResearchGate.

    We recently forwarded them a link to the preprint, so it’s possible we may see a response from this.
     
    Last edited: Mar 17, 2021
  8. joshua leisk

    joshua leisk Established Member (Voting Rights)

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    Metabolic studies will be confounded by the disparity between the time of day that samples are taken and relative to previous activity levels.

    A simple and unpleasant way to control for this is requiring a specific amount of exertion to induce PEM being the criteria before pulling a sample. Otherwise, using IT equivalence, it’s like taking a “memory dump” of running code, BEFORE the fault state exists, rather than looking at a “crash dump”, AFTER the fault has occurred.

    That said, you can see the CFS/ME state / conditions that will lead to the loop state I mentioned quite clearly on a NutraEval report.
     
  9. joshua leisk

    joshua leisk Established Member (Voting Rights)

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    I’m not sure if you noticed the part where I haven’t charged a single CFS/ME client during this entire 6 month process and worked full time, around the clock. The research has been entirely unfunded and done out of human interest.

    The patent was filed after I saw positive results for every single client. It seemed like spending the legal fees was justified, considering the scope indicated in the paper. This would also allow further conversations with any pharmaceutical companies who may be interested in sponsoring a trial with a view to developing a new drug or nutraceutical, depending on which interventions are chosen.

    One of the minor annoyances with the treatment, as it currently stands, is that it requires dosing a number of things, 3-4x a day. I came up with a solution around that, which would translate to once-per-day administration.

    Given the results achieved, all the existing clients are more than prepared to continue their existing dosing schedules.
     
  10. Trish

    Trish Moderator Staff Member

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    Rather than giving details of chemicals for which there is no evidence of relevance to ME/CFS, I would be more interested in a report of a pilot study, with diagnosis based on recognised criteria, and predefined outcome measures in terms of symptoms and ability to function, time scales etc. I can't see any funder being interested in funding a clinical trial without at least a properly run pilot study.
     
    Last edited: Mar 26, 2021
  11. Jonathan Edwards

    Jonathan Edwards Senior Member (Voting Rights)

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    As is usually the case for homeopathy. I'm afraid that all your reassurances simply confirm my impression that this is pseudoscience directed at making money - even if there is little chance that it ever will.
     
  12. joshua leisk

    joshua leisk Established Member (Voting Rights)

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    I guess you could always test it, instead of making assumptions.
     
  13. joshua leisk

    joshua leisk Established Member (Voting Rights)

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    This is being organised already.
     
    Last edited by a moderator: Mar 26, 2021
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  14. joshua leisk

    joshua leisk Established Member (Voting Rights)

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    Frankly, I'm feeling insulted. I hear claims of 'pseudoscience' and 'homeopathy', yet an unwillingness to understand or test the model. Failure to test and repeat something is pseudoscience.
     
  15. Perrier

    Perrier Senior Member (Voting Rights)

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    @joshualeisk

    Dear Mr Leisk
    what is the ideal way, in your view, to do the Nutreval test?
    They usually require a morning blood draw.

    ( our family member did one a year ago and will be repeating on Monday— so I am curious)

    thank you in advance
     
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  16. joshua leisk

    joshua leisk Established Member (Voting Rights)

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    I would do 2 NutraEval tests on the same day -
    One of them, fasted, AM.
    The other mid-afternoon at the time where symptoms normally worsen. Ideally this would involve a day with enough activity to produce a snapshot of the 'fault' state.
     
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  17. Jonathan Edwards

    Jonathan Edwards Senior Member (Voting Rights)

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    No assumptions. The MS is pseudoscience and you have applied for a patent. Seems to be facts.
    ("The true nature of an autoimmune disease" applied to ME seems just a bit over the top to me as a professor of immunology specialising in autoimmune disease.)

    Is this you Josh?

    Joshua is a Registered Gym Instructor with Fitness Australia.
    Joshua is a Level 1 Australian Register of Exercise Professional with over 1 year in the health and fitness industry.
     
  18. Hutan

    Hutan Moderator Staff Member

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    There is a high level of skepticism on this forum about people who claim to have discovered a treatment protocol. This is the natural result of having seen many such people (some with very strong scientific backgrounds), with none of the protocols bearing fruit. It's also a natural result of seeing a lot of desperate people (and, if you have ME/CFS, or you care a lot about someone who has ME/CFS, it's unusual not to be desperate for a treatment) waste a lot of time and money on pseudoscience.

    That's just how it is. And, with that history, and the frequency of bogus claims, most members are very selective about using their limited energy to evaluate complicated hypotheses in detail. If a skim read identifies some problems, then it's likely that the whole hypothesis will be dismissed.

    So, anyone presenting a new hypothesis and wanting to be taken seriously does need to present their ideas as well as possible, and accept that they will probably take some criticism along the way.
     
    Last edited: Mar 17, 2021
  19. Trish

    Trish Moderator Staff Member

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    Good, I'll await publication of the pilot study methods and results with interest. I hope it is being properly set up with clinican diagnosis and preregistration of outcome measures with clinical relevance (preferably not all subjective) and over sufficient time span to allow for symptom fluctuations. Will it be a double blind trial?

    Perhaps it would help if you engaged with the points raised by Snow Leopard.
     
  20. Snow Leopard

    Snow Leopard Senior Member (Voting Rights)

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    Sure, but if there are problems due to a dietary deficiency then it will show up anyway, which leads us back to the need for extracellular physiological mechanisms for the problem to show up post-exercise.

    I'm not seeing evidence of a physiological feedback loop.

    Yes, there is a problem with the succinic acid result, this could be a testing artefact.

    Evidence on succinic acid levels on urine tests are inconsistent (compared to controls).

    https://www.sciencedirect.com/science/article/abs/pii/S1077315096900125 (elevated succinic acid)
    https://journals.sagepub.com/doi/abs/10.3181/0702-RM-44 (decreased succinic acid)

    https://www.sciencedirect.com/science/article/abs/pii/S0009898105003116 (no difference)

    Anyway, back to metabolic (or other physiological) testing during or post-exercise.
    The main difficulty is prior research has been too easily dismissed due to claims of deconditioning, uncontrolled effort levels etc.

    The other problem is that single tests don't really capture the impact of PEM at all. The obvious solution to the latter point is repeat testing, which can be effectively self-controlled if measurements are taken at repeatable physiological thresholds, in relevant tissue (muscle and brain) using an in-vivo method. I'm sure you can guess the basic study design that I am suggesting.
    (and of course we're not merely interested in phosphocreatine or ATP or K+ or lactate levels, but more detailed findings)
     
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