Cross-reactivity with individual antibodies is never very surprising, especially when using peptides as antigen. There are a lot of unanswered questions raised by a mimicry theory like this. Mimicry with EBNA1 has been proposed in other contexts and not comet anything. I will wait and see if anyone can confirm.
Have you looked at the manuscript? preprint version:
https://www.researchsquare.com/article/rs-1239863/v1
I'd appreciate an expert look on this to see whether I'm full of shit or not - while there is some evidence of cross reactivity, the results don't provide a completely convincing story that the induction of GlialCAM antibodies is solely due to molecular mimicry.
They sequenced CSF B-cell receptor sequences from MS patients (and expressed them as antibodies) and found a fab region of one antibody "MS39p2w174" which had a high affinity for GlialCAM and a little bit of cross reactivity with EBNA1.
But the story they present suggests the mimicry is more of a coincidence, rather than a key aspect of the mechanism that led to autoreactivity.
While we demonstrated that MS39p2w174 and its unmutated germline ancestor bound EBNA1 with similar affinity (Fig. 2k,l), their binding affinities to GlialCAM differ significantly: affinity of MS39p2w174 to GlialCAM is ≥10-fold increased (KD EBNA1: 1.99 nM, SD: 0.63 nM; vs. KD GlialCAM: 190 pM, SD: 17pM), while germline binds GlialCAM with lower affinity (KD EBNA1: 4.19 nM, SD: 0.76 nM vs. KD GlialCAM: 10.46 nM, SD: 4.12 nM) (Fig. 3e,f).
They stated:
indicating that SHM is not required for effective EBNA1 binding and that naïve B cells have EBNA1-specificity
Crossreactivity of naïve B cells to self antigens is not unusual, but the key point is that after affinity maturation, the affinity of MS39p2w174 to EBNA1 only increased ~2 fold, whereas the affinity to the post-translational modified GlialCAM increased ~55 fold. Which suggests GlialCAM is the primary target all along.
If the mechanism of inducing self-reactivity to GlialCAM was due to "molecular mimicry", then surely the affinity of MS39p2w174 against EBNA1 would have also increased at a similar rate?
The authors discuss post-translational phosphorylation of the GlialCAM AA370-389 peptide (which is the putative binding region) in specific regions leading to higher affinity binding to MS39p2w17, and indeed it made a big difference in affinity. But this affinity was still much lower than to the GlialCAM protein itself. (also, the KDs in this section are confusingly presented out of order and I think one of the SDs is in error too, given two different SDs were given for the same KD value for the same peptide - hopefully this error will be corrected as I don't think this is the final version of the manuscript)
Next, the putative mimic region between EBNA1 AA386-405 and GlialCAM AA370-389 is only six peptides long and one of the peptides is different! (figure 4j) Six peptides is too short to be compelling.
The primary basis for their claim of molecular mimicry therefore is their EAE mouse model, which utilised the typical incomplete Freunds adjuvant (with mycobacterium tuberculosis) along with EBNA1 AA386-405 peptide or a 'random' peptide as a control. Notably, the experiment induced a strong 11-12 ish fold increase in anti EBNA1 IgG, but a weak anti GlialCAM IgG response ~1.4 fold increase from baseline compared to 1.15 fold increase in the control group. Notably, GlialCAM IgG response increased (1.9 fold change) after induction of EAE with the adjuvant mixture, whereas EBNA1 response decreased slightly over that same time frame. Again, GlialCAM IgG response also rose in the control group (1.4 fold from baseline), though by not as much. It needs to be better demonstrated whether these antibodies were actually pathological.
Lastly, the T-cell assays.
To further assess T cell reactivity in humans, PBMCs of MS patients (n=7) with elevated anti-EBNA1 and anti-GlialCAM titers were stimulated with EBNA1 and GlialCAM proteins and peptides and compared to PBMCs from healthy individuals. The CD4+ T cells trended towards more IFN-γ expression upon stimulation with EBNA1AA386-405 and GlialCAM ECD and ICD proteins, which resembled CD4+ T cells in mice (Extended Data Fig. 10k,l). In CD8+ T cells, high expression of IFN-γ and granzyme-B indicated a robust CD8+ T cell response against EBNA1 in both groups, while only CD8+ T cells from MS patients responded to GlialCAM ICD and GlialCAM ECD (Fig. 4f). One patient (MS16, Fig. 3o,p) showed extraordinarily high counts of IFN-γ+ granzyme-B+ CD8+ T cells upon stimulation with EBNA1, GlialCAM
ICD, and GlialCAMAA370-389 (Extended Data Fig. 10m).
The data shown in extended data 10 k,l do not show a compelling CD4+ T cell response to GlialCAM. This means there isn't a CD4+ T-cell molecular mimicry based mechanism that led to the antibodies against GlialCAM. Now if the high affinity antibodies showed strong cross reactivity against GlialCAM and EBNA1 at the same time, this wouldn't be a big deal. But they don't. While there is some evidence of CD8+ T cell activation in response to GlialCAM, this only occurred in a minority of MS patients - 3 out of the 7 tested.
Also,
@Simon M - any comments?