genetic testing

  1. D

    WGS (whole genome sequencing) findings possibly linked to mitochondrial/metabolic dysfunction – anyone with similar results?

    Hi everyone, I’m a a male in my 30s with ME/CFS (diagnosed in 2012 using ICC criteria), now mostly housebound with severe post-exertional malaise (PEM), disabling muscle pain and cramps (especially in the thighs), and profound fatigue. After years of inconclusive testing, I recently did whole...
  2. Hoopoe

    Useful resources for the interpretation of genetic tests and data

    Sequence Variant Nomenclature This website clearly explains what codes like NG_012232.1(NM_004006.2):c.93+1G>T and p.Trp24Cys mean. Ensembl This website has good tools, such as a variant effect predictor. It's more for those with a (bio)informatics background. ClinVar A public archive of the...
  3. Hoopoe

    Complex patterns of inheritance, including synergistic heterozygosity, in inborn errors of metabolism ..., 2019, Vockley et al

    Abstract Inborn errors of metabolism have traditionally been viewed as the quintessential single gene disorders; defects in one gene leads to loss of activity of one enzyme causing a metabolic imbalance and clinical disease. However, reality has never been quite that simple, and the classic...
  4. Hoopoe

    Synergistic heterozygosity in mice with inherited enzyme deficiencies of mitochondrial fatty acid beta-oxidation, 2005, Schuler et al

    We have used mice with inborn errors of mitochondrial fatty acid beta-oxidation to test the concept of synergistic heterozygosity. We postulated that clinical disease can result from heterozygous mutations in more than one gene in single or related metabolic pathways. Mice with combinations of...
  5. Hoopoe

    Synergistic heterozygosity: disease resulting from multiple partial defects in one or more metabolic pathways, 2000, Vockley et al

    Inborn errors of metabolism show considerable variation in the severity of symptoms. This is often ascribed to the differential effects of specific muta- tions on gene/enzyme function; however, such geno- type/phenotype correlations are usually imprecise. In addition, in some patients with...
  6. Hoopoe

    The unreliability of SNP chip based genetic testing

    Genetic testing can be performed with a device called SNP chip. Not all genetic testing is done with these. Direct-to-consumer genetic testing companies like 23andME often use SNP chips. A problem with SNP chips is that they are unreliable when it comes to rare gene variants. There is the risk...
  7. daftasabrush

    Whole Genomics Sequencing (WGS) - offers and discounts

    I thought a thread for any special offers would be useful. Currently Nebula have free worldwide delivery, and WGS x30 for $299 (normal price $1000), which is a bit over £200 since the exchange rate is good at the moment. There is a x100 offer on too, plus an upgrade from x30 to x100 for...
  8. daftasabrush

    Understanding gene raw gene data - from rs numbers to genes (CYP2C19)

    Apparently most of the population have variants or absence of the CYP2C19 gene. But how do I figure out from the raw genetic data (rs17878459 etc numbers, and alleles) which variants I do or don't have? I'm working from SNPedia but usually it's just a case of checking the rs number, and...
  9. Y

    Options for genetic testing

    I have a 23 and Me kit in my room for years. Hesitant to use it cause of privacy issues. Was wondering are there tests that a doctor's office can run that would be similar to 23 and Me? Then I wouldn't have to be concerned about my results, how they are going to use it now or in the future...
  10. TrixieStix

    Wall Street Journal: The Unfulfilled Promise of DNA Testing

    Wall Street Journal: The Unfulfilled Promise of DNA Testing The article weaves the story of a young sick girl thru it by discussing how genetic testing has resulted in her diagnosis changing over and over and over as the science changes constantly. And how this is happening to other patients...
  11. TiredSam

    Is Genetic Testing Overrated?

    https://www.bbc.co.uk/programmes/w3cswqtv BBC podcast, 23 minutes.
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