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  1. forestglip

    AI-driven multi-omics modeling of Myalgic Encephalomyelitis / Chronic Fatigue Syndrome, 2025, Xiong et al.

    Note that this paper is available to read on PubMed Central (PDF).
  2. forestglip

    Preprint Symptom Clusters in ME/CFS Reflect Distinct Neuroimmune and Autonomic Pathophysiological Mechanisms: A Translational Model, 2026, Habermann-Horstmeier

    Symptom Clusters in ME/CFS Reflect Distinct Neuroimmune and Autonomic Pathophysiological Mechanisms: A Translational Model Habermann-Horstmeier, Lotte; Horstmeier, Lukas Maximilian [Line breaks added] Background Myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS) is a debilitating...
  3. forestglip

    Advancing regulatory variant effect prediction with AlphaGenome 2026 Avsec et al

    The gene expression predictions were the only ones I tested so far (because that's the only ones I really understand what they are), but there are several other prediction types that might be useful. Maybe while the top variant in DecodeME predicts changes in expression in lots of genes, there...
  4. forestglip

    Genetics: Chromosome 20: ARFGEF2, CSE1L, STAU1

    There's a lot more for me to read about it to understand, but it's basically a machine learning model trained with lots of genetic and other data to look at a string of DNA (up to 1 million base pairs) and predict various things like how much RNA will be expressed all along the strand you gave...
  5. forestglip

    [IgG] Complexes from infectious ME/CFS, including post-COVID ME/CFS Disrupt Cellular Energetics and Alter Inflammatory Marker Secretion, 2026, Prusty+

    Hmm, yeah, the caption says each point is an image, but the number of points seem to add up to the number of individuals, so maybe they labeled it wrong?
  6. forestglip

    [IgG] Complexes from infectious ME/CFS, including post-COVID ME/CFS Disrupt Cellular Energetics and Alter Inflammatory Marker Secretion, 2026, Prusty+

    I think >= 10 images of cells per person, if I'm understanding this right: I don't have the energy right now to read this and try to figure out what exactly they mean by images/replicates etc. But I'd agree that if the right panel of 1B is based on a Mann-Whitney of many points per individual...
  7. forestglip

    Walk for ME 2026

    See this thread for discussion about Walk for ME from years 2023-2025: UK: Walk for ME
  8. forestglip

    Open Research study on ME/CFS and rest

    Here's the information sheet with more info, linked from the restandmecfs.com website: https://drive.proton.me/urls/RE5AGP2W3W#ghfXfevCCoou
  9. forestglip

    Trial Report Plasma cell targeting with the anti-CD38 antibody daratumumab in ME/CFS -a clinical pilot study, 2025, Fluge et al

    In this post? https://www.s4me.info/threads/plasma-cell-targeting-with-the-anti-cd38-antibody-daratumumab-in-me-cfs-a-clinical-pilot-study-2025-fluge-et-al.44736/post-672520 That table is showing baseline steps. I see Table 2 in the study has step count at 17–21 mo, but on a skim, I don't see a...
  10. forestglip

    Trial Report Plasma cell targeting with the anti-CD38 antibody daratumumab in ME/CFS -a clinical pilot study, 2025, Fluge et al

    Is it 6? Looking at the 6 "responders" in Supplementary Table 1, these are the changes in step count over a year: And the non-responders: Also, are the criteria for being classified as a responder and the time period for step count measurement the same when you talk about 1000 step count...
  11. forestglip

    Trial Report Plasma cell targeting with the anti-CD38 antibody daratumumab in ME/CFS -a clinical pilot study, 2025, Fluge et al

    Ok, but this doesn't change the issue outlined in the scenario above. If a study puts the people who have a small increase in step count due to a (very minor) benefit from Rituximab, along with naturally recovered individuals, into a responder group, while it doesn't put anyone taking Dara...
  12. forestglip

    Trial Report Plasma cell targeting with the anti-CD38 antibody daratumumab in ME/CFS -a clinical pilot study, 2025, Fluge et al

    Ah, sorry. I didn't realize you were comparing to responders in the Rituximab study. I think there might be some statistical issues with comparing averages of responders only. One way to think of it is, imagine both studies have a small number of individuals with a huge step count increase of...
  13. forestglip

    Trial Report Plasma cell targeting with the anti-CD38 antibody daratumumab in ME/CFS -a clinical pilot study, 2025, Fluge et al

    If we're talking about averages, it has to be about the whole group. Otherwise, it would be cherrypicking - the same as if we found one person in the Rituximab study with a 5000 step count increase, called them a responder, and were comparing to that. From Dara trial: So average increase of...
  14. forestglip

    Utility of Glucagon-Like-Peptide-1-Receptor Agonists in Mast Cell Activation Syndrome, 2025, Lawrence B. Afrin M.D, Blitsheyn et al

    It was a claim by Lawrence Afrin in one of his books. See this post: https://www.s4me.info/threads/mast-cell-activation-syndrome-mcas-discussion-thread.16483/post-666242
  15. forestglip

    Advancing regulatory variant effect prediction with AlphaGenome 2026 Avsec et al

    If you're wondering about the AlphaGenome scores for this variant, it's pretty much the same as other indels in the area, in terms of high scores (though with some sign flips). Edit: This is from the excel file in this post...
  16. forestglip

    Still to open Phase I Open-Label Safety Trial of Pembrolizumab for Neurological Post- Acute Sequelae of SARS-CoV-2 (PD1-PASC I)

    I think Nath is following a T cell exhaustion-type idea, where there is some sort of antigen that the immune system can't clear. It seems that inhibiting PD-1 increases immune response.
  17. forestglip

    Still to open Phase I Open-Label Safety Trial of Pembrolizumab for Neurological Post- Acute Sequelae of SARS-CoV-2 (PD1-PASC I)

    Phase I Open-Label Safety Trial of Pembrolizumab for Neurological Post- Acute Sequelae of SARS-CoV-2 (PD1-PASC I) Brief Summary Background: SARS-CoV-2 is the virus that causes COVID-19.Some people who recover from an acute COVID-19 infection may continue to have symptoms that persist for...
  18. forestglip

    The New Yorker: Did a Celebrated Researcher Obscure a Baby’s Poisoning?

    For people who have access to the full original article, is the Expression of Concern actually mentioned on that page? I can only view the abstract, but I would think the Expression of Concern should show up for everyone. I don't see any mention of a 2008 Letter to the Editor about the case...
  19. forestglip

    The New Yorker: Did a Celebrated Researcher Obscure a Baby’s Poisoning?

    Looks like the New Yorker article led to some action. Retraction Watch: Lancet flags long-scrutinized report of infant poisoned by opioids in breast milk The Lancet: Expression of Concern: Pharmacogenetics of morphine poisoning in a breastfed neonate of a codeine-prescribed mother Edit...
  20. forestglip

    Still to open [Houston, Texas, USA] Effect of Metabolic Modulation on a Post-acute COVID-19 Vaccination Syndrome (PACVS) Cohort (ViTAL-SCAN19)

    The paper says enrollment requires ME/CFS criteria, though I don't see that in the ClinicalTrials.gov registration yet. From Wikipedia:
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